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Species belonging to selected taxon:
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
ABOUT THIS RECORD
ID:
MNEST002482
species:
Saccharum officinarum
miRNA family:
MIRf101
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCGTCGGTCAGGCCGTCGAC
miRNA*
TGGCGGCCTGATCAAGACGCTGG
mismatches:
3
bulges:
2
View larger
pre-miRNA
CGGGTGGAGCTT
TGGCGGCCTGATCAAGACGCTGG
CGGAGGAGATTGAAGCGCGCGCCGCCTCGGCGCTACCTGGTGCGCTGGAGGCCGGCGCGTCCGCC
GCCTCCGACAGGCTGGAG
TCCGTCGGTCAGGCCGTCGAC
GACCTCGGT
dot-bracket secondary structure
.((((......(
(((((((((((((..((((.(((
((((.............((((((((((((((((........))))).)))).)))))))))))))
).(((((......)))))
..)))))))))))))))))).
.))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record